artículo académico

• Microbiota Dysbiosis in Mytilus chilensis Is Induced by Hypoxia, Leading to Molecular and Functional Consequences.  MICROORGANISMS.  13(4). 2025
• Nanopore-Based Metagenomic Approaches for Detection of Bacterial Pathogens in Recirculating Aquaculture Systems.  FISHES.  10(10). 2025
• Skin transcriptome and microbiome profiling are associated with Atlantic salmon resistance/susceptibility to sea lice infestation.  FISH & SHELLFISH IMMUNOLOGY.  166. 2025
• Effects of Microbiota on the Soiling Process of PV Modules in Arid Zones of the Atacama Desert.  APPLIED SCIENCES-BASEL.  14(19). 2024
• Environmental influence on the Atlantic salmon transcriptome and methylome during sea lice infestations.  FISH & SHELLFISH IMMUNOLOGY.  151. 2024
• Hypoxia in the Blue Mussel Mytilus chilensis Induces a Transcriptome Shift Associated with Endoplasmic Reticulum Stress, Metabolism, and Immune Response.  GENES.  15(6). 2024
• The Atlantic salmon microbiome infected with the sea louse Caligus rogercresseyi reveals tissue-specific functional dysbiosis.  AQUACULTURE.  580. 2024
• Atlantic Salmon (Salmo salar) Transfer to Seawater by Gradual Salinity Changes Exhibited an Increase in The Intestinal Microbial Abundance and Richness.  MICROORGANISMS.  11(1). 2023
• Chromosome-Level Genome Assembly of the Blue Mussel Mytilus chilensis Reveals Molecular Signatures Facing the Marine Environment.  GENES.  14(4). 2023
• Transcriptome Signatures of Atlantic Salmon-Resistant Phenotypes against Sea Lice Infestation Are Associated with Tissue Repair.  GENES.  14(5). 2023
• Whole-genome resequencing in the sea louse Caligus rogercresseyi uncovers gene duplications and copy number variants associated with pesticide resistance.  FRONTIERS IN MARINE SCIENCE.  10. 2023
• Competing endogenous rna-networks reveal key regulatory micrornas involved in the response of atlantic salmon to a novel orthomyxovirus.  DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY.  132. 2022
• Exploring sea lice vaccines against early stages of infestation in atlantic salmon (salmo salar).  VACCINES.  10(7). 2022
• Nanopore sequencing evidenced the presence of fish bacterial pathogens in the sea louse (caligus rogercresseyi) microbiota collected from distant salmon farms in chile.  AQUACULTURE.  552. 2022
• Proximity ligation strategy for the genomic reconstruction of microbial communities associated with the ectoparasite Caligus rogercresseyi.  SCIENTIFIC REPORTS.  12(1). 2022
• Whole-Genome Transcript Expression Profiling Reveals Novel Insights into Transposon Genes and Non-Coding RNAs during Atlantic Salmon Seawater Adaptation.  BIOLOGY-BASEL.  11(1). 2022
• Chromosome-scale genome assembly of the sea louse Caligus rogercresseyi by SMRT sequencing and Hi-C analysis.  SCIENTIFIC DATA.  8(1). 2021
• Comprehensive Transcriptome Analyses in Sea Louse Reveal Novel Delousing Drug Responses Through MicroRNA regulation.  MARINE BIOTECHNOLOGY.  23(5):710-723. 2021
• The wastewater microbiome: A novel insight for COVID-19 surveillance.  SCIENCE OF THE TOTAL ENVIRONMENT.  764. 2021
• Transcriptome and morphological analysis in Caligus rogercresseyi uncover the effects of Atlantic salmon vaccination with IPath (R).  FISH & SHELLFISH IMMUNOLOGY.  117:169-178. 2021
• Trypsin Genes Are Regulated through the miRNA Bantam and Associated with Drug Sensitivity in the Sea Louse Caligus rogercresseyi.  NON-CODING RNA.  7(4). 2021
• Induced-iron overdose modulate the immune response in Atlantic salmon increasing the susceptibility to Piscirickettsia salmonis infection.  AQUACULTURE.  521. 2020
• Long-term serial culture of Piscirickettsia salmonis leads to a genomic and transcriptomic reorganization affecting bacterial virulence.  AQUACULTURE.  529. 2020
• Nanopore sequencing of microbial communities reveals the potential role of sea lice as a reservoir for fish pathogens.  SCIENTIFIC REPORTS.  10(1). 2020
• Catching the complexity of salmon-louse interactions.  FISH & SHELLFISH IMMUNOLOGY.  90:199-209. 2019
• The race between host and sea lice in the Chilean salmon farming: a genomic approach.  REVIEWS IN AQUACULTURE.  11(2):325-339. 2019
• Comparative analysis of long non-coding RNAs in Atlantic and Coho salmon reveals divergent transcriptome responses associated with immunity and tissue repair during sea lice infestation.  DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY.  87:36-50. 2018
• Dual RNA-Seq Uncovers Metabolic Amino Acids Dependency of the Intracellular Bacterium Piscirickettsia salmonis Infecting Atlantic Salmon.  FRONTIERS IN MICROBIOLOGY.  9:1-11. 2018
• In the shadow: The emerging role of long non-coding RNAs in the immune response of Atlantic salmon.  DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY.  73:193-205. 2017
• Long noncoding RNAs: Unexplored players in the drug response of the sea louse Caligus rogercresseyi.  AGRI GENE.  4:1-7. 2017
• MicroRNA-based transcriptomic responses of Atlantic salmon during infection by the intracellular bacterium Piscirickettsia salmonis.  DEVELOPMENTAL AND COMPARATIVE IMMUNOLOGY.  77:287-296. 2017
• The Caligus rogercresseyi miRNome: Discovery and transcriptome profiling during the sea lice ontogeny.  AGRI GENE.  4:8-22. 2017
• Caligus rogercresseyi serine proteases: Transcriptomic analysis in response to delousing drugs treatments.  AQUACULTURE.  465:65-77. 2016
• Long noncoding RNAs (lncRNAs) dynamics evidence immunomodulation during ISAV-Infected Atlantic salmon (Salmo salar).  SCIENTIFIC REPORTS.  6:1-13. 2016
• Novel insights into the response of Atlantic salmon (Salmo salar) to Piscirickettsia salmonis: Interplay of coding genes and lncRNAs during bacterial infection.  FISH & SHELLFISH IMMUNOLOGY.  59:427-438. 2016
• Characterization of the growth-related transcriptome in California red abalone (Haliotis rufescens) through RNA-Seq analysis.  MARINE GENOMICS.  24:199-202. 2015
• High-throughput transcriptome analysis of ISAV-infected Atlantic salmon Salmo salar unravels divergent immune responses associated to head-kidney, liver and gills tissues.  FISH & SHELLFISH IMMUNOLOGY.  45:367-377. 2015
• Identification of microRNAs Associated With Sexual Maturity in Rainbow Trout Brain and Testis Through Small RNA Deep Sequencing.  MOLECULAR REPRODUCTION AND DEVELOPMENT.  82(9):651-662. 2015
• MicroRNA biogenesis pathway from the salmon louse (Caligus rogercresseyi): Emerging role in delousing drug response.  GENE .  555(2):231-241. 2015